docs: update stale msgpack references in source file docstrings
store.py: tags/releases now stored as JSON (not msgpack); update module docstring and layout diagram. Legacy .msgpack files are still supported for reading during migration.
gc.py: orphaned commits/snapshots now live in the unified object store (.muse/objects/), not in commits/*.msgpack or snapshots/*.msgpack.
sha256:ce13f74711079871d5357f6a082e299fa7da3b28293c8fbafc5724327b2808a1
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sha256:7028c18f2902e7ac029ca5babd5fbfcec842f39a092207a0adb9da721dc19e76
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