refactor: move all msgpack caches into .muse/cache/ with clean filenames
Phase 3 of cache reorganization: - stat_cache.msgpack → cache/stat.msgpack - symbol_cache.msgpack → cache/symbols.msgpack - callgraph_cache.msgpack → cache/callgraph.msgpack - implicit_edge_cache.msgpack → cache/implicit_edges.msgpack
All cache classes store _cache_dir (pointing to .muse/cache/) instead of _muse_dir. Fixture helpers in all four test files updated to create the cache/ subdir. All 163 tests pass.
sha256:a1c0f2152c984d7fc795deb2b387d64ddeca74213e802069292d0cbc837b5fe1
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sha256:45968ebf484f48a75020a972ea34a1d46091d7ed75aa28bf2d9bda3bcbadc6fe
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