manifest.py
python
sha256:660fcac1df3ab28f61862e961890bd2ca8b754fa0242079d93ca1e25037ec8a6
chore(tests): add docstring to tests/__init__.py so rc14 tr…
Human
32 days ago
| 1 | """Hierarchical vault snapshot manifests for the Muse knowtation domain. |
| 2 | |
| 3 | A vault manifest organises a snapshot's notes into a two-level hierarchy:: |
| 4 | |
| 5 | ProjectManifest ← top-level project grouping (by frontmatter ``project`` key) |
| 6 | └─ NoteEntry ← one Markdown note's metadata + hashes |
| 7 | |
| 8 | This structure enables *partial re-parsing*: when merging, only notes whose |
| 9 | ``content_hash`` changed need to be re-parsed by the note engine. Notes in |
| 10 | unchanged projects are reused from the cached manifest, making three-way |
| 11 | merges on large vaults significantly faster. |
| 12 | |
| 13 | The ``frontmatter_hash`` in :class:`NoteEntry` is a SHA-256 of the note's |
| 14 | *frontmatter JSON* rather than its raw bytes. Two notes that differ only in |
| 15 | whitespace inside the body but have identical frontmatter will have the same |
| 16 | ``frontmatter_hash``. |
| 17 | |
| 18 | Public API |
| 19 | ---------- |
| 20 | - :class:`NoteEntry` — per-note metadata. |
| 21 | - :class:`ProjectManifest` — project-level grouping. |
| 22 | - :class:`VaultManifest` — complete hierarchical vault manifest. |
| 23 | - :func:`build_vault_manifest` — build from a flat snapshot manifest. |
| 24 | - :func:`diff_vault_manifests` — find added/removed/modified notes between two. |
| 25 | - :func:`write_vault_manifest` — persist to ``.muse/knowtation_manifests/<id>.json``. |
| 26 | - :func:`read_vault_manifest` — load from disk. |
| 27 | """ |
| 28 | |
| 29 | from __future__ import annotations |
| 30 | |
| 31 | import hashlib |
| 32 | import json |
| 33 | import logging |
| 34 | import pathlib |
| 35 | from typing import TypedDict |
| 36 | |
| 37 | from muse.core._types import Manifest |
| 38 | |
| 39 | logger = logging.getLogger(__name__) |
| 40 | |
| 41 | type _ProjectNoteMap = dict[str, list[str]] # project → [note_path, ...] |
| 42 | type _NoteEntryMap = dict[str, "NoteEntry"] # note_path → NoteEntry |
| 43 | |
| 44 | |
| 45 | # --------------------------------------------------------------------------- |
| 46 | # Data types |
| 47 | # --------------------------------------------------------------------------- |
| 48 | |
| 49 | |
| 50 | class NoteEntry(TypedDict): |
| 51 | """Metadata for a single Markdown note. |
| 52 | |
| 53 | ``path`` Workspace-relative POSIX path. |
| 54 | ``content_hash`` SHA-256 of the raw note bytes (from the object store). |
| 55 | ``frontmatter_hash`` SHA-256 of the note's YAML frontmatter JSON. |
| 56 | Empty string when the note has no frontmatter. |
| 57 | ``project`` Value of the ``project`` frontmatter key, or ``""`` |
| 58 | when absent. |
| 59 | ``note_type`` File extension classification (``"markdown"`` or |
| 60 | ``"other"``). |
| 61 | ``section_count`` Number of Markdown headings (H1–H6) in the note. |
| 62 | 0 for non-Markdown files or parse errors. |
| 63 | ``size_bytes`` Raw file size in bytes (0 if unavailable). |
| 64 | """ |
| 65 | |
| 66 | path: str |
| 67 | content_hash: str |
| 68 | frontmatter_hash: str |
| 69 | project: str |
| 70 | note_type: str |
| 71 | section_count: int |
| 72 | size_bytes: int |
| 73 | |
| 74 | |
| 75 | class ProjectManifest(TypedDict): |
| 76 | """Manifest for one project grouping of notes. |
| 77 | |
| 78 | ``project`` Project name (value of frontmatter ``project`` key, |
| 79 | or ``"__root__"`` for notes without a project). |
| 80 | ``project_hash`` SHA-256 of all sorted ``content_hash`` values in this |
| 81 | project — stable fingerprint for change detection. |
| 82 | ``notes`` All :class:`NoteEntry` records in this project. |
| 83 | ``total_notes`` Total number of notes tracked in this project. |
| 84 | ``markdown_notes`` Number of notes with a ``.md`` extension. |
| 85 | """ |
| 86 | |
| 87 | project: str |
| 88 | project_hash: str |
| 89 | notes: list[NoteEntry] |
| 90 | total_notes: int |
| 91 | markdown_notes: int |
| 92 | |
| 93 | |
| 94 | class VaultManifest(TypedDict): |
| 95 | """Complete hierarchical manifest for one vault snapshot. |
| 96 | |
| 97 | ``snapshot_id`` The snapshot this manifest was built from. |
| 98 | ``manifest_hash`` SHA-256 of this manifest's JSON — stable cache key. |
| 99 | ``projects`` All :class:`ProjectManifest` entries, sorted by project name. |
| 100 | ``total_notes`` Total notes across all projects. |
| 101 | ``markdown_notes`` Notes with ``.md`` extension. |
| 102 | ``total_sections`` Sum of ``section_count`` across all notes. |
| 103 | """ |
| 104 | |
| 105 | snapshot_id: str |
| 106 | manifest_hash: str |
| 107 | projects: list[ProjectManifest] |
| 108 | total_notes: int |
| 109 | markdown_notes: int |
| 110 | total_sections: int |
| 111 | |
| 112 | |
| 113 | # --------------------------------------------------------------------------- |
| 114 | # Note type classification |
| 115 | # --------------------------------------------------------------------------- |
| 116 | |
| 117 | _NOTE_SUFFIXES: frozenset[str] = frozenset({".md", ".markdown", ".mdx"}) |
| 118 | |
| 119 | |
| 120 | def _note_type_of(file_path: str) -> str: |
| 121 | """Return the note-type label for *file_path* based on its extension.""" |
| 122 | suffix = pathlib.PurePosixPath(file_path).suffix.lower() |
| 123 | return "markdown" if suffix in _NOTE_SUFFIXES else "other" |
| 124 | |
| 125 | |
| 126 | def _is_markdown(file_path: str) -> bool: |
| 127 | """Return ``True`` if *file_path* has a Markdown extension.""" |
| 128 | suffix = pathlib.PurePosixPath(file_path).suffix.lower() |
| 129 | return suffix in _NOTE_SUFFIXES |
| 130 | |
| 131 | |
| 132 | # --------------------------------------------------------------------------- |
| 133 | # Frontmatter and section parsing (lightweight, no external deps) |
| 134 | # --------------------------------------------------------------------------- |
| 135 | |
| 136 | |
| 137 | def _parse_frontmatter_hash(content: bytes) -> tuple[str, str]: |
| 138 | """Extract and hash the YAML frontmatter block from *content*. |
| 139 | |
| 140 | Returns a ``(frontmatter_hash, project)`` tuple. When no frontmatter is |
| 141 | present, both values are empty strings. Parsing is intentionally minimal |
| 142 | at Phase 1.1 — a proper typed ``FrontmatterSchema`` will be introduced in |
| 143 | Phase 1.3. |
| 144 | |
| 145 | The hash is computed over the raw YAML text (not parsed values) so that |
| 146 | semantically identical frontmatter with different whitespace produces |
| 147 | different hashes — acceptable for the manifest cache key until Phase 1.3 |
| 148 | introduces normalised hashing. |
| 149 | """ |
| 150 | try: |
| 151 | text = content.decode("utf-8", errors="replace") |
| 152 | except Exception: |
| 153 | return "", "" |
| 154 | |
| 155 | if not text.startswith("---"): |
| 156 | return "", "" |
| 157 | |
| 158 | # Find the closing "---" marker on its own line. |
| 159 | rest = text[3:] |
| 160 | end = rest.find("\n---") |
| 161 | if end == -1: |
| 162 | return "", "" |
| 163 | |
| 164 | raw_fm = rest[:end].strip() |
| 165 | fm_hash = hashlib.sha256(raw_fm.encode()).hexdigest() |
| 166 | |
| 167 | # Extract ``project`` value — simple key: value scan (no full YAML parse). |
| 168 | project = "" |
| 169 | for line in raw_fm.splitlines(): |
| 170 | stripped = line.strip() |
| 171 | if stripped.startswith("project:"): |
| 172 | value = stripped[len("project:"):].strip().strip("\"'") |
| 173 | project = value |
| 174 | break |
| 175 | |
| 176 | return fm_hash, project |
| 177 | |
| 178 | |
| 179 | def _count_sections(content: bytes) -> int: |
| 180 | """Count Markdown headings (# through ######) in *content*. |
| 181 | |
| 182 | Returns 0 when the note has no headings or when *content* cannot be |
| 183 | decoded as UTF-8. |
| 184 | """ |
| 185 | try: |
| 186 | text = content.decode("utf-8", errors="replace") |
| 187 | except Exception: |
| 188 | return 0 |
| 189 | |
| 190 | # Skip the frontmatter block before counting headings. |
| 191 | body = text |
| 192 | if text.startswith("---"): |
| 193 | rest = text[3:] |
| 194 | end = rest.find("\n---") |
| 195 | if end != -1: |
| 196 | body = rest[end + 4:] |
| 197 | |
| 198 | count = 0 |
| 199 | for line in body.splitlines(): |
| 200 | if line.startswith("#"): |
| 201 | # Accept # through ###### at the start of a line (ATX headings). |
| 202 | stripped = line.lstrip("#") |
| 203 | if stripped and (stripped[0] == " " or stripped[0] == "\t"): |
| 204 | count += 1 |
| 205 | |
| 206 | return count |
| 207 | |
| 208 | |
| 209 | # --------------------------------------------------------------------------- |
| 210 | # Builder |
| 211 | # --------------------------------------------------------------------------- |
| 212 | |
| 213 | |
| 214 | def build_vault_manifest( |
| 215 | snapshot_id: str, |
| 216 | flat_manifest: Manifest, |
| 217 | repo_root: pathlib.Path, |
| 218 | ) -> VaultManifest: |
| 219 | """Build a :class:`VaultManifest` from a flat ``{path: content_hash}`` dict. |
| 220 | |
| 221 | Attempts to parse frontmatter and count sections for Markdown files. |
| 222 | Falls back gracefully for binary files or parse errors. All blob reads |
| 223 | go through the Muse object store so only committed content is parsed. |
| 224 | |
| 225 | Args: |
| 226 | snapshot_id: The snapshot this manifest represents. |
| 227 | flat_manifest: ``{workspace_path: sha256}`` from the snapshot. |
| 228 | repo_root: Repository root for object store access. |
| 229 | |
| 230 | Returns: |
| 231 | A fully populated :class:`VaultManifest`. |
| 232 | """ |
| 233 | from muse.core.object_store import read_object |
| 234 | |
| 235 | # Group notes by project (frontmatter ``project`` key or ``"__root__"``). |
| 236 | entries: list[NoteEntry] = [] |
| 237 | total_sections = 0 |
| 238 | total_markdown = 0 |
| 239 | |
| 240 | for file_path in sorted(flat_manifest): |
| 241 | content_hash = flat_manifest[file_path] |
| 242 | note_type = _note_type_of(file_path) |
| 243 | fm_hash = "" |
| 244 | project = "__root__" |
| 245 | section_count = 0 |
| 246 | |
| 247 | if note_type == "markdown": |
| 248 | source = read_object(repo_root, content_hash) |
| 249 | if source is not None: |
| 250 | try: |
| 251 | fm_hash, raw_project = _parse_frontmatter_hash(source) |
| 252 | project = raw_project or "__root__" |
| 253 | section_count = _count_sections(source) |
| 254 | except Exception: |
| 255 | logger.debug("Note parse failed for %s", file_path) |
| 256 | total_markdown += 1 |
| 257 | |
| 258 | total_sections += section_count |
| 259 | |
| 260 | # size_bytes requires reading the blob; use 0 as a safe default when |
| 261 | # the object is not locally cached. Phase 1.4 will hydrate this field. |
| 262 | entries.append(NoteEntry( |
| 263 | path=file_path, |
| 264 | content_hash=content_hash, |
| 265 | frontmatter_hash=fm_hash, |
| 266 | project=project, |
| 267 | note_type=note_type, |
| 268 | section_count=section_count, |
| 269 | size_bytes=0, |
| 270 | )) |
| 271 | |
| 272 | # Group entries by project. |
| 273 | project_map: _ProjectNoteMap = {} |
| 274 | entry_map: _NoteEntryMap = {e["path"]: e for e in entries} |
| 275 | for entry in entries: |
| 276 | project_map.setdefault(entry["project"], []).append(entry["path"]) |
| 277 | |
| 278 | projects: list[ProjectManifest] = [] |
| 279 | for proj_name in sorted(project_map): |
| 280 | note_paths = sorted(project_map[proj_name]) |
| 281 | proj_notes = [entry_map[p] for p in note_paths] |
| 282 | proj_hashes = [e["content_hash"] for e in proj_notes] |
| 283 | proj_hash = hashlib.sha256( |
| 284 | "|".join(sorted(proj_hashes)).encode() |
| 285 | ).hexdigest() |
| 286 | md_count = sum(1 for n in proj_notes if n["note_type"] == "markdown") |
| 287 | projects.append(ProjectManifest( |
| 288 | project=proj_name, |
| 289 | project_hash=proj_hash, |
| 290 | notes=proj_notes, |
| 291 | total_notes=len(proj_notes), |
| 292 | markdown_notes=md_count, |
| 293 | )) |
| 294 | |
| 295 | manifest_json = json.dumps( |
| 296 | {"snapshot_id": snapshot_id, "projects": projects}, sort_keys=True |
| 297 | ) |
| 298 | manifest_hash = hashlib.sha256(manifest_json.encode()).hexdigest() |
| 299 | |
| 300 | return VaultManifest( |
| 301 | snapshot_id=snapshot_id, |
| 302 | manifest_hash=manifest_hash, |
| 303 | projects=projects, |
| 304 | total_notes=len(flat_manifest), |
| 305 | markdown_notes=total_markdown, |
| 306 | total_sections=total_sections, |
| 307 | ) |
| 308 | |
| 309 | |
| 310 | # --------------------------------------------------------------------------- |
| 311 | # Diff |
| 312 | # --------------------------------------------------------------------------- |
| 313 | |
| 314 | |
| 315 | class NoteFileDiff(TypedDict): |
| 316 | """Change record from :func:`diff_vault_manifests` for one note.""" |
| 317 | |
| 318 | path: str |
| 319 | change: str # "added" | "removed" | "modified" | "frontmatter_changed" |
| 320 | old_hash: str |
| 321 | new_hash: str |
| 322 | old_fm_hash: str |
| 323 | new_fm_hash: str |
| 324 | frontmatter_change: bool # True when fm_hash differs (frontmatter mutated) |
| 325 | |
| 326 | |
| 327 | def diff_vault_manifests( |
| 328 | base: VaultManifest, |
| 329 | target: VaultManifest, |
| 330 | ) -> list[NoteFileDiff]: |
| 331 | """Produce a per-note change list between two :class:`VaultManifest` objects. |
| 332 | |
| 333 | Notes with identical ``content_hash`` values are skipped (no change). |
| 334 | Notes where only the ``content_hash`` changed but ``frontmatter_hash`` is |
| 335 | the same are marked ``"modified"`` with ``frontmatter_change=False``. |
| 336 | Notes where ``frontmatter_hash`` changed are ``"frontmatter_changed"`` |
| 337 | with ``frontmatter_change=True``. |
| 338 | |
| 339 | Args: |
| 340 | base: Manifest for the earlier state. |
| 341 | target: Manifest for the later state. |
| 342 | |
| 343 | Returns: |
| 344 | Sorted list of :class:`NoteFileDiff` records. |
| 345 | """ |
| 346 | base_notes: _NoteEntryMap = {} |
| 347 | for proj in base["projects"]: |
| 348 | for note in proj["notes"]: |
| 349 | base_notes[note["path"]] = note |
| 350 | |
| 351 | target_notes: _NoteEntryMap = {} |
| 352 | for proj in target["projects"]: |
| 353 | for note in proj["notes"]: |
| 354 | target_notes[note["path"]] = note |
| 355 | |
| 356 | diffs: list[NoteFileDiff] = [] |
| 357 | all_paths = sorted(set(base_notes) | set(target_notes)) |
| 358 | |
| 359 | for path in all_paths: |
| 360 | bn = base_notes.get(path) |
| 361 | tn = target_notes.get(path) |
| 362 | |
| 363 | if bn is None and tn is not None: |
| 364 | diffs.append(NoteFileDiff( |
| 365 | path=path, change="added", |
| 366 | old_hash="", new_hash=tn["content_hash"], |
| 367 | old_fm_hash="", new_fm_hash=tn["frontmatter_hash"], |
| 368 | frontmatter_change=True, |
| 369 | )) |
| 370 | elif bn is not None and tn is None: |
| 371 | diffs.append(NoteFileDiff( |
| 372 | path=path, change="removed", |
| 373 | old_hash=bn["content_hash"], new_hash="", |
| 374 | old_fm_hash=bn["frontmatter_hash"], new_fm_hash="", |
| 375 | frontmatter_change=True, |
| 376 | )) |
| 377 | elif bn is not None and tn is not None: |
| 378 | if bn["content_hash"] == tn["content_hash"]: |
| 379 | continue # No change. |
| 380 | fm_changed = bn["frontmatter_hash"] != tn["frontmatter_hash"] |
| 381 | diffs.append(NoteFileDiff( |
| 382 | path=path, |
| 383 | change="frontmatter_changed" if fm_changed else "modified", |
| 384 | old_hash=bn["content_hash"], new_hash=tn["content_hash"], |
| 385 | old_fm_hash=bn["frontmatter_hash"], new_fm_hash=tn["frontmatter_hash"], |
| 386 | frontmatter_change=fm_changed, |
| 387 | )) |
| 388 | |
| 389 | return diffs |
| 390 | |
| 391 | |
| 392 | # --------------------------------------------------------------------------- |
| 393 | # Persistence |
| 394 | # --------------------------------------------------------------------------- |
| 395 | |
| 396 | |
| 397 | def write_vault_manifest( |
| 398 | repo_root: pathlib.Path, manifest: VaultManifest |
| 399 | ) -> None: |
| 400 | """Persist a :class:`VaultManifest` to ``.muse/knowtation_manifests/<hash>.json``. |
| 401 | |
| 402 | Creates the directory if absent. Skips writing when the file already |
| 403 | exists (content-addressed store is immutable). |
| 404 | |
| 405 | Args: |
| 406 | repo_root: Repository root. |
| 407 | manifest: The manifest to write. |
| 408 | """ |
| 409 | store_dir = repo_root / ".muse" / "knowtation_manifests" |
| 410 | store_dir.mkdir(parents=True, exist_ok=True) |
| 411 | path = store_dir / f"{manifest['manifest_hash']}.json" |
| 412 | if not path.exists(): |
| 413 | path.write_text(json.dumps(manifest), encoding="utf-8") |
| 414 | |
| 415 | |
| 416 | def read_vault_manifest( |
| 417 | repo_root: pathlib.Path, manifest_hash: str |
| 418 | ) -> VaultManifest | None: |
| 419 | """Load a :class:`VaultManifest` by its hash. |
| 420 | |
| 421 | Args: |
| 422 | repo_root: Repository root. |
| 423 | manifest_hash: The ``manifest_hash`` of the target manifest. |
| 424 | |
| 425 | Returns: |
| 426 | The deserialized :class:`VaultManifest`, or ``None`` if not found. |
| 427 | """ |
| 428 | path = ( |
| 429 | repo_root / ".muse" / "knowtation_manifests" / f"{manifest_hash}.json" |
| 430 | ) |
| 431 | if not path.exists(): |
| 432 | return None |
| 433 | raw: VaultManifest = json.loads(path.read_text(encoding="utf-8")) |
| 434 | return raw |
File History
2 commits
sha256:660fcac1df3ab28f61862e961890bd2ca8b754fa0242079d93ca1e25037ec8a6
chore(tests): add docstring to tests/__init__.py so rc14 tr…
Human
32 days ago
sha256:d8316ffae901be06347e16ab55be11868eb519dd16ade3e8aa16a99e662f7e62
baseline: rc14 re-baseline after rc3 store corruption recovery
Human
patch
32 days ago