--- title: "Experiment log: qPCR standard curve — April sample run" project: research-lab-template tags: - experiment - qpcr - qc date: 2026-04-07 --- # qPCR standard curve — April sample run **Operator:** Template user | **Instrument:** qPCR-01 | **Kit lot:** DEMO-LOT-001 ## Objective Establish a **six-point standard curve** for housekeeping and target amplicons before running unknowns from the cytokine panel pilot. ## Setup 100 ng/µL RNA, **1:5** serial dilutions (six tubes); triplicate 10 µL reactions with ROX per manufacturer. ## Observations Standards show **single melting peaks** (62°C anneal); NTCs undetermined at 40 cycles. Layout: standards cols 1–3; NTC col 4; unknowns from col 5 next run. ## Data (summary) **Cq:** 1e0 mean **18.4** (SD 0.12); 1e-5 mean **35.1** (SD 0.21). Slope efficiency ≈ **98%** (target band 90–110%). ## Issues - Well A7 showed high fluorescence before cycle 1—**excluded** as meniscus bubble; repeat if unknowns border that well. ## Next steps Import Cq into the analysis notebook (link path in a child note); run unknowns on the **same master-mix lot**; append protocol with **30s** denature (beats 10s in our test).